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Structural Visualisation and Molecular Modelling

BWF Pathway Level

Beginner

Session & Time

Platforms

Eight (8) sessions
4 July - 22 August 2021
​​Every Sunday | 13:00 - 17:00 (GMT+8)
Zoom & Discord

Programme

Date
Time
Topic
4 July 2021
13:00 - 17:00
Basics of 3D protein structure data: Acquisition, storage and visualization

11 July 2021
13:00 - 17:00
Basics of 3D protein structure data: Acquisition, storage and visualization II

18 July 2021
13:00 - 17:00
VMD: Basics (GUI based) to access and analyse protein structure data  

25 July 2021
13:00 - 17:00
Pymol: Basic (GUI based) to access and analyse protein structure data
1 August 2021
13:00 - 17:00
Basics of 3D protein structure data: Building missing data using Modeller
8 August 2021
13:00 - 17:00
Homology modelling: Protein structure prediction - 1
15 August 2021
13:00 - 17:00
Homology modelling: Protein structure prediction - 2
22​ August 2021
13:00 - 17:00
Protein Structure Refinement: Energy minimization   

Instructor

Ashar completed his PhD, in 2018, in the area of computational biochemistry from Massey University in Auckland, New Zealand and has since been working as a postdoc at the Bioinformatics Institute at the Agency for Science, Technology and Research in Singapore. His primary work focuses on providing clinicians with the capacity to explore polymorphisms in the human genome and their phenotypic effects. Additionally he also explores the area of structural phylogenetics and quantum computing. He is also an science communication enthusiast and loves to engage with in coming researchers on potential new computational methodologies that can be employed to enhance the quality of research. He is also an instructor with Software Carpentry and routinely conducts scientific computing workshops in different countries.
Ashar J. Malik, PhD (NZ)
​Postdoctoral Research Fellow, Bioinformatics Institute, A*STAR, Singapore 
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